EnhancerDB
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  3. rs2500270[chr1:3242454]
Enhancers that have rs2500270[chr1:3242454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2500270[chr1:3242454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3242439 3242457 SRF JASPAR yes 26280163
chr1 3242451 3242457 YY1 JASPAR yes 26280164
chr1 3242453 3242467 PLAG1 JASPAR yes 26280165
Genes associated with rs2500270[chr1:3242454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More