EnhancerDB
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  3. rs2544727[chr5:174808210]
Enhancers that have rs2544727[chr5:174808210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 174798965 174816415 enh38688
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Lung (A549) Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2544727[chr5:174808210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 174808197 174808218 IRF1 JASPAR yes 68002158
chr5 174808199 174808214 PRDM1 JASPAR yes 68002159
chr5 174808208 174808223 FOXP1 JASPAR yes 68002160
chr5 174808209 174808230 ZNF263 JASPAR yes 68002161
Genes associated with rs2544727[chr5:174808210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More