EnhancerDB
  1. Home
  2. SNP
  3. rs2549932[chr16:29620594]
Enhancers that have rs2549932[chr16:29620594]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2549932[chr16:29620594]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29620316 29620975 ZNF143 GTRD no Epithelial (MCF-7) 21702944
chr16 29620318 29620942 ZNF274 GTRD no Bone Marrow (K562) 21702945
chr16 29620320 29620988 ZBTB33 GTRD no Lung (A549) 21702946
chr16 29620354 29620980 ZNF274 GTRD no Bone Marrow (K562) 21702947
chr16 29620406 29620955 ZNF274 GTRD no Bone Marrow (K562) 21702948
chr16 29620460 29620981 ZNF143 GTRD no Epithelial (MCF-7) 21702949
chr16 29620480 29620920 ZNF274 GTRD no Bone Marrow (K562) 21702950
chr16 29620482 29620923 ZNF143 GTRD no Epithelial (MCF-7) 21702951
chr16 29620486 29620925 ZNF143 GTRD no Epithelial (MCF-7) 21702952
chr16 29620491 29620891 ZNF274 GTRD no Liver (HepG2) 21702953
chr16 29620494 29620926 ZNF274 GTRD no Bone Marrow (K562) 21702954
chr16 29620495 29620990 ZBTB33 GTRD no Lung (A549) 21702955
chr16 29620498 29620916 ZBTB33 GTRD no Lung (A549) 21702956
chr16 29620511 29620910 ZNF143 GTRD no Epithelial (MCF-7) 21702957
chr16 29620515 29620903 ZNF274 GTRD no Liver (HepG2) 21702958
chr16 29620549 29620920 ZNF274 GTRD no Liver (HepG2) 21702959
chr16 29620554 29620915 ZNF274 GTRD no Bone Marrow (K562) 21702960
chr16 29620579 29620904 ZNF274 GTRD no Liver (HepG2) 21702961
chr16 29620591 29620604 SMAD2 JASPAR yes 10268373
chr16 29620591 29620921 ZBTB33 GTRD no Lung (A549) 21702962
Genes associated with rs2549932[chr16:29620594], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More