EnhancerDB
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  3. rs2561401[chr6:39191384]
Enhancers that have rs2561401[chr6:39191384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 39165525 39196155 enh23215
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Liver Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2561401[chr6:39191384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 39191380 39191398 SRF JASPAR yes 101517901
chr6 39191384 39191388 H1TF2 TRANSFAC yes 101517902
chr6 39191384 39191388 NFE TRANSFAC yes 101517903
chr6 39191384 39191388 SRF TRANSFAC yes 101517904
Genes associated with rs2561401[chr6:39191384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More