EnhancerDB
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  3. rs2589120[chr17:78846803]
Enhancers that have rs2589120[chr17:78846803]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2589120[chr17:78846803]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78846791 78846805 PLAG1 JASPAR yes 56288253
chr17 78846793 78846805 TFAP2A JASPAR yes 56288254
chr17 78846793 78846806 TFAP2A JASPAR yes 56288255
chr17 78846793 78846806 TFAP2B JASPAR yes 56288256
chr17 78846793 78846806 TFAP2C JASPAR yes 56288257
chr17 78846793 78846807 GLIS2 JASPAR yes 56288258
chr17 78846794 78846803 TFAP2A JASPAR yes 56288259
chr17 78846794 78846807 TFAP2A JASPAR yes 56288260
chr17 78846794 78846807 TFAP2B JASPAR yes 56288261
chr17 78846794 78846807 TFAP2C JASPAR yes 56288262
chr17 78846800 78846813 NFKB1 JASPAR yes 56288263
chr17 78846800 78846813 NFKB2 JASPAR yes 56288264
chr17 78846801 78846812 NFKB1 JASPAR yes 56288265
Genes associated with rs2589120[chr17:78846803], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More