EnhancerDB
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Enhancers that have rs259889[chr11:61820365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61807063 61824450 enh13967
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Breast Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs259889[chr11:61820365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61819634 61821631 TCF7L2 GTRD no Colon (HCT116) 21488278
chr11 61819677 61821734 TCF7L2 GTRD no Colon (HCT116) 21488279
chr11 61819846 61821816 AR GTRD no Prostate (PC-3) 21488280
chr11 61819865 61820843 P63 GTRD no Skin (Keratinocyte) 21488281
chr11 61819867 61820875 P63 GTRD no Skin (Keratinocyte) 21488282
chr11 61819887 61820836 P63 GTRD no Skin (Keratinocyte) 21488283
chr11 61819895 61820842 P63 GTRD no Skin (Keratinocyte) 21488284
chr11 61819922 61821721 ZNF143 GTRD no Epithelial (MCF-7) 21488285
chr11 61819998 61822013 ZNF143 GTRD no Epithelial (MCF-7) 21488286
chr11 61820014 61820719 ZNF274 GTRD no Bone Marrow (K562) 21488287
chr11 61820042 61820782 ZNF274 GTRD no Bone Marrow (K562) 21488288
chr11 61820048 61820827 ZNF274 GTRD no Bone Marrow (K562) 21488289
chr11 61820063 61820684 ZNF274 GTRD no Bone Marrow (K562) 21488290
chr11 61820078 61820601 TCF7L2 GTRD no Colon (HCT116) 21488291
chr11 61820078 61820694 ZNF274 GTRD no Bone Marrow (K562) 21488292
chr11 61820139 61820611 ZNF274 GTRD no Bone Marrow (K562) 21488293
chr11 61820152 61820589 ZNF274 GTRD no Bone Marrow (K562) 21488294
chr11 61820164 61821327 ZNF143 GTRD no Epithelial (MCF-7) 21488295
chr11 61820170 61821467 TCF7L2 GTRD no Colon (HCT116) 21488296
chr11 61820221 61821527 ZNF143 GTRD no Epithelial (MCF-7) 21488297
chr11 61820240 61821406 ZNF143 GTRD no Epithelial (MCF-7) 21488298
chr11 61820245 61820564 TCF7L2 GTRD no Colon (HCT116) 21488299
chr11 61820351 61820366 SOX21 JASPAR yes 39183830
chr11 61820360 61820369 SRY JASPAR yes 39183832
chr11 61820363 61820382 PAX5 JASPAR yes 39183833
Genes associated with rs259889[chr11:61820365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More