EnhancerDB
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  3. rs2616539[chr3:11580371]
Enhancers that have rs2616539[chr3:11580371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 11569249 11608890 enh7001
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs2616539[chr3:11580371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 11580352 11580373 IRF1 JASPAR yes 428117
chr3 11580354 11580375 IRF1 JASPAR yes 428119
Genes associated with rs2616539[chr3:11580371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 10365707 10749716 - ATP2B2 ENSG00000157087.12 10749716 830655 Lung 0.0131435 3407