EnhancerDB
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  3. rs2624173[chr5:86417350]
Enhancers that have rs2624173[chr5:86417350]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 86407105 86421035 enh22410
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus
chr5 86417249 86417398 vista48343
VISTA
Transcript factors that have rs2624173[chr5:86417350]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 86417065 86417521 JUND UCSC Txn Factor no Conserved 108535649
chr5 86417093 86417417 CEBPB UCSC Txn Factor no Conserved 108535650
chr5 86417106 86417506 FOS UCSC Txn Factor no Conserved 108535651
chr5 86417111 86417483 JUN UCSC Txn Factor no Conserved 108535652
chr5 86417199 86417408 RUNX3 UCSC Txn Factor no Conserved 108535653
chr5 86417211 86417393 BATF UCSC Txn Factor no Conserved 108535654
chr5 86417337 86417355 SRF JASPAR yes 63982269
chr5 86417337 86417355 SRF JASPAR yes 70677409
chr5 86417340 86417361 IRF1 JASPAR yes 63982270
chr5 86417340 86417361 IRF1 JASPAR yes 70677410
chr5 86417348 86417353 ETS2 TRANSFAC yes 63982271
chr5 86417348 86417353 ETS2 TRANSFAC yes 70677411
Genes associated with rs2624173[chr5:86417350], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More