EnhancerDB
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  3. rs2639742[chr1:228973401]
Enhancers that have rs2639742[chr1:228973401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs2639742[chr1:228973401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228973020 228974092 POLR2A UCSC Txn Factor no Conserved 107877499
chr1 228973391 228973410 CTCF JASPAR yes 35934165
chr1 228973395 228973405 FIGLA JASPAR yes 35934166
chr1 228973397 228973402 USF2 TRANSFAC yes 35934167
chr1 228973399 228973411 GLI2 JASPAR yes 35934168
chr1 228973399 228973411 ZBTB7C JASPAR yes 35934169
chr1 228973400 228973412 ZBTB7A JASPAR yes 35934170
Genes associated with rs2639742[chr1:228973401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More