EnhancerDB
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  3. rs2648541[chr3:9396697]
Enhancers that have rs2648541[chr3:9396697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 9386845 9398579 enh20314
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs2648541[chr3:9396697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 9396693 9396704 HOXA10 JASPAR yes 346947
chr3 9396694 9396703 CDX1 JASPAR yes 346948
Genes associated with rs2648541[chr3:9396697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 9908398 9921938 - CIDEC ENSG00000187288.6 9921938 511701 Esophagus 0.21202 3391