EnhancerDB
  1. Home
  2. SNP
  3. rs2648543[chr3:9396522]
Enhancers that have rs2648543[chr3:9396522]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 9386845 9398579 enh20314
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs2648543[chr3:9396522]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 9396508 9396523 FOXA1 JASPAR yes 346898
chr3 9396509 9396524 FOXP1 JASPAR yes 346899
chr3 9396510 9396522 FOXC2 JASPAR yes 346901
chr3 9396510 9396524 FOXF2 JASPAR yes 346902
chr3 9396511 9396522 FOXB1 JASPAR yes 346906
chr3 9396511 9396522 FOXC1 JASPAR yes 346907
chr3 9396512 9396523 FOXA1 JASPAR yes 346914
chr3 9396514 9396528 PAX6 JASPAR yes 346915
Genes associated with rs2648543[chr3:9396522], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More