EnhancerDB
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  3. rs2672872[chr17:78847752]
Enhancers that have rs2672872[chr17:78847752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2672872[chr17:78847752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78847167 78847767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797458
chr17 78847167 78847767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308015
chr17 78847340 78847860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797462
chr17 78847340 78847860 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308019
chr17 78847412 78847822 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108308022
chr17 78847441 78847765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797466
chr17 78847441 78847765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308024
chr17 78847496 78847852 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108308027
chr17 78847503 78847793 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21797468
chr17 78847503 78847793 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108308028
chr17 78847522 78847832 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21797469
chr17 78847522 78847832 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108308029
chr17 78847552 78847836 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108308030
Genes associated with rs2672872[chr17:78847752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More