EnhancerDB
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  3. rs2682324[chr12:53363218]
Enhancers that have rs2682324[chr12:53363218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2682324[chr12:53363218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53362872 53363487 TCF7L2 GTRD no Colon (HCT116) 21548329
chr12 53363212 53363233 IRF1 JASPAR yes 120967967
chr12 53363213 53363228 FOXP1 JASPAR yes 120967968
chr12 53363213 53363234 IRF1 JASPAR yes 120967969
chr12 53363214 53363225 FOXP2 JASPAR yes 120967970
chr12 53363214 53363226 FOXC2 JASPAR yes 120967971
chr12 53363214 53363229 STAT2 JASPAR yes 120967972
chr12 53363214 53363235 IRF1 JASPAR yes 120967973
chr12 53363215 53363230 FOXP1 JASPAR yes 120967974
chr12 53363217 53363232 FOXP1 JASPAR yes 120967975
chr12 53363218 53363233 FOXP1 JASPAR yes 120967976
Genes associated with rs2682324[chr12:53363218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More