EnhancerDB
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  3. rs2682325[chr12:53363398]
Enhancers that have rs2682325[chr12:53363398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2682325[chr12:53363398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53362872 53363487 TCF7L2 GTRD no Colon (HCT116) 21548329
chr12 53363388 53363402 POU1F1 JASPAR yes 120968004
chr12 53363394 53363409 MEF2A JASPAR yes 120968005
chr12 53363395 53363410 MEF2C JASPAR yes 120968006
chr12 53363396 53363408 MEF2A JASPAR yes 120968007
chr12 53363396 53363408 MEF2B JASPAR yes 120968008
chr12 53363396 53363408 MEF2D JASPAR yes 120968009
chr12 53363398 53363402 YY1 TRANSFAC yes 120968010
Genes associated with rs2682325[chr12:53363398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More