EnhancerDB
  1. Home
  2. SNP
  3. rs2682330[chr12:53365027]
Enhancers that have rs2682330[chr12:53365027]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2682330[chr12:53365027]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53364526 53365093 TCF7L2 GTRD no Colon (HCT116) 21548367
chr12 53364703 53365045 ZNF143 GTRD no Epithelial (MCF-7) 21548368
chr12 53364824 53366315 ZNF274 GTRD no Cervix (HeLa-S3) 21548369
chr12 53364824 53366315 ZNF274 GTRD no Cervix (HeLa-S3) 108035198
chr12 53364863 53366584 ZNF274 GTRD no Bone Marrow (K562) 21548370
chr12 53364863 53366584 ZNF274 GTRD no Bone Marrow (K562) 108035199
chr12 53364874 53366208 ZNF274 GTRD no Bone Marrow (K562) 21548371
chr12 53364874 53366208 ZNF274 GTRD no Bone Marrow (K562) 108035200
chr12 53364899 53366594 ZNF274 GTRD no Cervix (HeLa-S3) 21548372
chr12 53364899 53366594 ZNF274 GTRD no Cervix (HeLa-S3) 108035201
chr12 53364913 53365835 ZNF274 GTRD no Cervix (HeLa-S3) 21548373
chr12 53364913 53365835 ZNF274 GTRD no Cervix (HeLa-S3) 108035202
chr12 53364919 53367051 ZNF274 GTRD no Bone Marrow (K562) 21548374
chr12 53364919 53367051 ZNF274 GTRD no Bone Marrow (K562) 108035203
chr12 53364922 53365793 ZNF274 GTRD no Bone Marrow (K562) 21548375
chr12 53364922 53365793 ZNF274 GTRD no Bone Marrow (K562) 108035204
chr12 53364927 53366960 ZNF274 GTRD no Bone Marrow (K562) 21548376
chr12 53364927 53366960 ZNF274 GTRD no Bone Marrow (K562) 108035205
chr12 53364956 53366370 ZNF274 GTRD no Bone Marrow (K562) 21548377
chr12 53364956 53366370 ZNF274 GTRD no Bone Marrow (K562) 108035206
chr12 53364966 53365793 ZNF274 GTRD no Bone Marrow (K562) 21548378
chr12 53364966 53365793 ZNF274 GTRD no Bone Marrow (K562) 108035207
chr12 53364990 53366414 ZNF274 GTRD no Bone Marrow (K562) 21548379
chr12 53364990 53366414 ZNF274 GTRD no Bone Marrow (K562) 108035208
chr12 53364998 53367341 TCF7L2 GTRD no Colon (HCT116) 21548380
chr12 53364998 53367341 TCF7L2 GTRD no Colon (HCT116) 108035209
chr12 53365003 53366382 ZNF274 GTRD no Bone Marrow (K562) 21548381
chr12 53365003 53366382 ZNF274 GTRD no Bone Marrow (K562) 108035210
chr12 53365012 53365032 PPARG JASPAR yes 120968222
chr12 53365015 53365030 ESR2 JASPAR yes 120968223
chr12 53365015 53365035 ESR1 JASPAR yes 120968224
chr12 53365027 53365045 RARA JASPAR yes 120968226
Genes associated with rs2682330[chr12:53365027], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53290977 53343738 - KRT8 ENSG00000170421.7 53343738 21289 Esophagus 0.13143 12105