EnhancerDB
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  3. rs2724396[chr1:207992634]
Enhancers that have rs2724396[chr1:207992634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs2724396[chr1:207992634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207992248 207992744 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21374129
chr1 207992282 207992692 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21374130
chr1 207992395 207992675 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21374132
chr1 207992628 207992634 SP1 TRANSFAC yes 34878398
chr1 207992630 207992644 EBF1 JASPAR yes 34878399
chr1 207992631 207992645 PLAG1 JASPAR yes 34878400
Genes associated with rs2724396[chr1:207992634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More