EnhancerDB
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  3. rs2725243[chr4:89097309]
Enhancers that have rs2725243[chr4:89097309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89096939 89101889 enh21675
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2725243[chr4:89097309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89097303 89097324 IRF1 JASPAR yes 91155198
chr4 89097304 89097319 FOXP1 JASPAR yes 91155199
chr4 89097304 89097325 IRF1 JASPAR yes 91155200
chr4 89097305 89097316 FOXP2 JASPAR yes 91155201
chr4 89097306 89097321 FOXP1 JASPAR yes 91155202
chr4 89097308 89097323 FOXP1 JASPAR yes 91155203
chr4 89097308 89097329 IRF1 JASPAR yes 91155204
chr4 89097309 89097324 FOXP1 JASPAR yes 91155205
Genes associated with rs2725243[chr4:89097309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More