EnhancerDB
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  3. rs272828[chr1:36625556]
Enhancers that have rs272828[chr1:36625556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36623405 36636370 enh239
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs272828[chr1:36625556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36625554 36625566 POU2F1 JASPAR yes 28121614
chr1 36625554 36625567 POU3F3 JASPAR yes 28121615
chr1 36625554 36625568 POU1F1 JASPAR yes 28121616
chr1 36625555 36625567 POU3F1 JASPAR yes 28121617
chr1 36625555 36625567 POU3F2 JASPAR yes 28121618
chr1 36625555 36625568 POU2F2 JASPAR yes 28121619
chr1 36625556 36625564 POU2F1 TRANSFAC yes 28121620
chr1 36625556 36625565 POU3F4 JASPAR yes 28121621
chr1 36625556 36625565 POU5F1B JASPAR yes 28121622
Genes associated with rs272828[chr1:36625556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More