EnhancerDB
  1. Home
  2. SNP
  3. rs2729888[chr11:19401124]
Enhancers that have rs2729888[chr11:19401124]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19384885 19404406 enh13831
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs2729888[chr11:19401124]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19401111 19401126 IRF9 JASPAR yes 37769877
chr11 19401114 19401126 IRF1 JASPAR yes 37769878
chr11 19401116 19401129 SMAD2 JASPAR yes 37769879
chr11 19401118 19401126 MEIS2 JASPAR yes 37769880
chr11 19401118 19401126 MEIS3 JASPAR yes 37769881
Genes associated with rs2729888[chr11:19401124], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 18477371 18501147 + LDHAL6A ENSG00000166800.5 18477371 899977 Esophagus 0.294217 10629