EnhancerDB
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  3. rs2729896[chr11:19388660]
Enhancers that have rs2729896[chr11:19388660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19384885 19404406 enh13831
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs2729896[chr11:19388660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19388646 19388666 PPARG JASPAR yes 37768115
chr11 19388647 19388665 ESR2 JASPAR yes 37768116
chr11 19388647 19388667 PPARG JASPAR yes 37768117
chr11 19388649 19388663 CREB3L1 JASPAR yes 37768119
chr11 19388650 19388661 USF1 JASPAR yes 37768121
chr11 19388651 19388661 TFE3 JASPAR yes 37768122
chr11 19388651 19388661 TFEB JASPAR yes 37768123
chr11 19388651 19388661 TFEC JASPAR yes 37768124
chr11 19388651 19388662 USF2 JASPAR yes 37768125
Genes associated with rs2729896[chr11:19388660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More