EnhancerDB
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  3. rs2748090[chr1:228966918]
Enhancers that have rs2748090[chr1:228966918]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs2748090[chr1:228966918]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228966302 228966952 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388825
chr1 228966602 228967252 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388827
chr1 228966858 228967234 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21388828
chr1 228966865 228967185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388829
chr1 228966887 228967163 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388830
chr1 228966902 228967158 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388831
chr1 228966908 228967138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388832
chr1 228966910 228966923 TFAP2A JASPAR yes 35933270
chr1 228966910 228966923 TFAP2B JASPAR yes 35933271
chr1 228966910 228966923 TFAP2C JASPAR yes 35933272
chr1 228966911 228966922 EBF1 JASPAR yes 35933273
chr1 228966915 228967116 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388833
Genes associated with rs2748090[chr1:228966918], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More