EnhancerDB
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  3. rs2748102[chr1:228972141]
Enhancers that have rs2748102[chr1:228972141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs2748102[chr1:228972141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228972128 228972143 TFAP2A JASPAR yes 35934007
chr1 228972128 228972143 TFAP2C JASPAR yes 35934008
chr1 228972130 228972143 TFAP2A JASPAR yes 35934009
chr1 228972130 228972143 TFAP2B JASPAR yes 35934010
chr1 228972130 228972143 TFAP2C JASPAR yes 35934011
chr1 228972130 228972144 EBF1 JASPAR yes 35934012
chr1 228972130 228972145 TFAP2A JASPAR yes 35934013
chr1 228972131 228972142 EBF1 JASPAR yes 35934014
chr1 228972131 228972447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388845
chr1 228972131 228972447 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877480
chr1 228972133 228972142 TFAP2A JASPAR yes 35934015
Genes associated with rs2748102[chr1:228972141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More