EnhancerDB
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  3. rs2748108[chr1:228973498]
Enhancers that have rs2748108[chr1:228973498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs2748108[chr1:228973498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228973020 228974092 POLR2A UCSC Txn Factor no Conserved 107877499
chr1 228973484 228973499 HSF1 JASPAR yes 35934190
chr1 228973485 228973498 HSF1 JASPAR yes 35934191
chr1 228973485 228973498 HSF2 JASPAR yes 35934192
chr1 228973485 228973498 HSF4 JASPAR yes 35934193
chr1 228973489 228973504 HSF1 JASPAR yes 35934194
chr1 228973497 228973504 SPI1 JASPAR yes 35934195
chr1 228973497 228973505 EHF JASPAR yes 35934196
chr1 228973497 228973516 RFX2 JASPAR yes 35934197
Genes associated with rs2748108[chr1:228973498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More