EnhancerDB
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  3. rs2748109[chr1:228977962]
Enhancers that have rs2748109[chr1:228977962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs2748109[chr1:228977962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228977793 228978257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388932
chr1 228977793 228978257 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877549
chr1 228977803 228978463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388933
chr1 228977803 228978463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877550
chr1 228977851 228978355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388934
chr1 228977851 228978355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877551
chr1 228977882 228978422 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877552
chr1 228977885 228978425 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877553
chr1 228977892 228978468 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877554
chr1 228977893 228978423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388935
chr1 228977893 228978423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877555
chr1 228977908 228978284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388936
chr1 228977908 228978284 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877556
chr1 228977909 228978165 ZNF274 GTRD no Bone Marrow (K562) 107877557
chr1 228977914 228978310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388937
chr1 228977914 228978310 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877558
chr1 228977924 228978294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388938
chr1 228977924 228978294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877559
chr1 228977928 228978384 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388939
chr1 228977928 228978384 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877560
chr1 228977959 228978189 ZNF143 GTRD no Epithelial (MCF-7) 21388940
chr1 228977959 228978189 ZNF143 GTRD no Epithelial (MCF-7) 107877561
Genes associated with rs2748109[chr1:228977962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More