EnhancerDB
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Enhancers that have rs275773[chr12:125125876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs275773[chr12:125125876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125125007 125125953 ZNF143 GTRD no Epithelial (MCF-7) 21581535
chr12 125125043 125125941 ZNF143 GTRD no Epithelial (MCF-7) 21581536
chr12 125125154 125125887 ZNF143 GTRD no Epithelial (MCF-7) 21581537
chr12 125125160 125125891 ZNF143 GTRD no Epithelial (MCF-7) 21581539
chr12 125125203 125125907 ZNF143 GTRD no Epithelial (MCF-7) 21581541
chr12 125125360 125125915 ZNF143 GTRD no Epithelial (MCF-7) 21581546
chr12 125125366 125125888 ZNF143 GTRD no Epithelial (MCF-7) 21581547
chr12 125125874 125125885 FOXB1 JASPAR yes 124402883
chr12 125125874 125125885 FOXC1 JASPAR yes 124402884
chr12 125125875 125125879 YY1 TRANSFAC yes 124402885
chr12 125125876 125125889 EOMES JASPAR yes 124402886
Genes associated with rs275773[chr12:125125876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More