EnhancerDB
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  3. rs2788879[chr6:44632409]
Enhancers that have rs2788879[chr6:44632409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 44626938 44650498 enh23263
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 44632359 44632804 vista52098
VISTA
Transcript factors that have rs2788879[chr6:44632409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44632392 44632412 RREB1 JASPAR yes 70371250
chr6 44632392 44632412 RREB1 JASPAR yes 101853396
chr6 44632394 44632414 RREB1 JASPAR yes 70371251
chr6 44632394 44632414 RREB1 JASPAR yes 101853397
chr6 44632396 44632416 RREB1 JASPAR yes 70371252
chr6 44632396 44632416 RREB1 JASPAR yes 101853398
chr6 44632399 44632419 RREB1 JASPAR yes 70371254
chr6 44632399 44632419 RREB1 JASPAR yes 101853400
chr6 44632402 44632422 RREB1 JASPAR yes 70371255
chr6 44632402 44632422 RREB1 JASPAR yes 101853401
chr6 44632403 44632412 SP1 TRANSFAC yes 70371256
chr6 44632403 44632412 SP1 TRANSFAC yes 101853402
chr6 44632404 44632410 SP1 TRANSFAC yes 70371257
chr6 44632404 44632410 SP1 TRANSFAC yes 101853403
chr6 44632404 44632414 SP1 JASPAR yes 70371258
chr6 44632404 44632414 SP1 JASPAR yes 101853404
chr6 44632404 44632424 RREB1 JASPAR yes 70371259
chr6 44632404 44632424 RREB1 JASPAR yes 101853405
chr6 44632405 44632412 SP1 TRANSFAC yes 70371260
chr6 44632405 44632412 SP1 TRANSFAC yes 101853406
chr6 44632406 44632411 SP1 TRANSFAC yes 70371261
chr6 44632406 44632411 SP1 TRANSFAC yes 101853407
chr6 44632406 44632412 SP1 TRANSFAC yes 70371262
chr6 44632406 44632412 SP1 TRANSFAC yes 101853408
chr6 44632406 44632426 RREB1 JASPAR yes 70371263
chr6 44632406 44632426 RREB1 JASPAR yes 101853409
chr6 44632408 44632428 RREB1 JASPAR yes 70371264
chr6 44632408 44632428 RREB1 JASPAR yes 101853410
Genes associated with rs2788879[chr6:44632409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More