EnhancerDB
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  3. rs2794988[chr1:52430920]
Enhancers that have rs2794988[chr1:52430920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52426231 52441515 enh26698
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Large Intestine Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs2794988[chr1:52430920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52430899 52430920 IRF1 JASPAR yes 28879113
chr1 52430906 52430927 IRF1 JASPAR yes 28879114
chr1 52430910 52430924 SPIC JASPAR yes 28879115
chr1 52430910 52430924 STAT1 JASPAR yes 28879116
chr1 52430910 52430925 PRDM1 JASPAR yes 28879117
chr1 52430910 52430925 STAT2 JASPAR yes 28879118
chr1 52430910 52430931 IRF1 JASPAR yes 28879119
chr1 52430914 52430935 IRF1 JASPAR yes 28879120
Genes associated with rs2794988[chr1:52430920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More