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- SNP
- rs2799064[chr1:957898]
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
953925 |
964515 |
enh26489 |
|
|
Transcript factors that have rs2799064[chr1:957898]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
957884
|
957899
|
RFX5
|
JASPAR
|
yes
|
|
26175450
|
|
|
chr1
|
957887
|
957901
|
PLAG1
|
JASPAR
|
yes
|
|
26175451
|
|
Genes associated with rs2799064[chr1:957898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
955503
|
991496
|
+
|
AGRN
|
ENSG00000188157.9
|
955503
|
0
|
Esophagus
|
0.000898808
|
13
|
|
|
chr1
|
955503
|
991496
|
+
|
AGRN
|
ENSG00000188157.9
|
955503
|
0
|
Heart
|
2.50318e-11
|
13
|
|
|
chr1
|
955503
|
991496
|
+
|
AGRN
|
ENSG00000188157.9
|
955503
|
0
|
Heart
|
2.58972e-06
|
13
|
|
|
chr1
|
955503
|
991496
|
+
|
AGRN
|
ENSG00000188157.9
|
955503
|
0
|
Stomach
|
0.00134379
|
13
|
|