EnhancerDB
  1. Home
  2. SNP
  3. rs2807340[chr1:22580473]
Enhancers that have rs2807340[chr1:22580473]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs2807340[chr1:22580473]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22580456 22580476 RREB1 JASPAR yes 27355127
chr1 22580467 22580475 SP1 TRANSFAC yes 27355128
chr1 22580467 22580477 SP1 JASPAR yes 27355129
chr1 22580468 22580474 SP1 TRANSFAC yes 27355130
chr1 22580468 22580478 SP1 JASPAR yes 27355131
chr1 22580470 22580475 SP1 TRANSFAC yes 27355132
chr1 22580471 22580483 TFAP2A JASPAR yes 27355133
chr1 22580471 22580483 TFAP2B JASPAR yes 27355134
chr1 22580471 22580483 TFAP2C JASPAR yes 27355135
Genes associated with rs2807340[chr1:22580473], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More