EnhancerDB
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  3. rs2816893[chr1:90423039]
Enhancers that have rs2816893[chr1:90423039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs2816893[chr1:90423039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90423033 90423046 SMAD2 JASPAR yes 30638805
chr1 90423038 90423041 MYB TRANSFAC yes 30638806
Genes associated with rs2816893[chr1:90423039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More