EnhancerDB
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  3. rs2820080[chr1:111758206]
Enhancers that have rs2820080[chr1:111758206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 111752645 111768115 enh564
Skin (Keratinocyte) Liver (HepG2) Large Intestine Blood (T-cell) Esophagus Liver Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Breast Pancreas (Panc1) Thymus Stomach
Transcript factors that have rs2820080[chr1:111758206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 111756679 111759382 POLR2A UCSC Txn Factor no Conserved 107821853
chr1 111756679 111759382 POLR2A UCSC Txn Factor no Conserved 107821854
chr1 111756682 111759382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21329055
chr1 111756682 111759382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107821855
chr1 111756682 111759382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107821856
chr1 111758160 111758904 ZNF274 GTRD no Bone Marrow (K562) 107821870
chr1 111758170 111759188 ZBTB33 GTRD no Lung (A549) 107821871
chr1 111758171 111758988 ZNF274 GTRD no Cervix (HeLa-S3) 107821872
chr1 111758196 111758212 NFYA JASPAR yes 31513778
chr1 111758201 111759065 ZBTB33 GTRD no Lung (A549) 107821873
chr1 111758205 111758209 ESR1 TRANSFAC yes 31513779
Genes associated with rs2820080[chr1:111758206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More