EnhancerDB
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  3. rs2840330[chr1:169088485]
Enhancers that have rs2840330[chr1:169088485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs2840330[chr1:169088485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169088472 169088487 HNF1A JASPAR yes 32984648
chr1 169088473 169088486 HNF1B JASPAR yes 32984649
chr1 169088478 169088490 POU3F1 JASPAR yes 32984650
chr1 169088480 169088489 POU5F1B JASPAR yes 32984651
chr1 169088481 169088489 FOXL1 JASPAR yes 32984652
Genes associated with rs2840330[chr1:169088485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More