EnhancerDB
  1. Home
  2. SNP
  3. rs28408686[chr17:30846624]
Enhancers that have rs28408686[chr17:30846624]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 30840656 30854616 enh17103
Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (GM12878) Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr17 30846365 30846870 vista24436
VISTA
Transcript factors that have rs28408686[chr17:30846624]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 30846284 30846660 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108250167
chr17 30846331 30846821 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250168
chr17 30846339 30846775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750549
chr17 30846339 30846775 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250169
chr17 30846361 30846671 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108250170
chr17 30846383 30847903 POLR2A UCSC Txn Factor no Conserved 108250171
chr17 30846383 30847903 POLR2A UCSC Txn Factor no Conserved 108250172
chr17 30846396 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750550
chr17 30846396 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250173
chr17 30846444 30846708 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750552
chr17 30846444 30846708 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250176
chr17 30846452 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750553
chr17 30846452 30846716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250177
chr17 30846616 30846760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21750554
chr17 30846616 30846760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108250179
chr17 30846619 30846633 GLIS2 JASPAR yes 21220386
chr17 30846619 30846633 ZIC1 JASPAR yes 21220387
chr17 30846619 30846633 GLIS2 JASPAR yes 53886815
chr17 30846619 30846633 ZIC1 JASPAR yes 53886816
chr17 30846619 30846634 ZIC3 JASPAR yes 21220388
chr17 30846619 30846634 ZIC4 JASPAR yes 21220389
chr17 30846619 30846634 ZIC3 JASPAR yes 53886817
chr17 30846619 30846634 ZIC4 JASPAR yes 53886818
chr17 30846621 30846635 PLAG1 JASPAR yes 21220390
chr17 30846621 30846635 PLAG1 JASPAR yes 53886819
Genes associated with rs28408686[chr17:30846624], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More