EnhancerDB
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  3. rs28412508[chr19:13165569]
Enhancers that have rs28412508[chr19:13165569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr19 13163511 13167355 vista791
VISTA
Transcript factors that have rs28412508[chr19:13165569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13161827 13165835 ZNF274 GTRD no Blood (GM12878) 107690198
chr19 13161827 13165835 ZNF274 GTRD no Blood (GM12878) 108388200
chr19 13161972 13165703 ZNF274 GTRD no Blood (GM12878) 107690200
chr19 13161972 13165703 ZNF274 GTRD no Blood (GM12878) 108388202
chr19 13162075 13165634 ZNF274 GTRD no Blood (GM12878) 107690204
chr19 13162075 13165634 ZNF274 GTRD no Blood (GM12878) 108388206
chr19 13162198 13165863 ZNF274 GTRD no Cervix (HeLa-S3) 107690206
chr19 13162198 13165863 ZNF274 GTRD no Cervix (HeLa-S3) 108388208
chr19 13162228 13165592 ZNF274 GTRD no Bone Marrow (K562) 107690208
chr19 13162228 13165592 ZNF274 GTRD no Bone Marrow (K562) 108388210
chr19 13162232 13165980 ZNF274 GTRD no Bone Marrow (K562) 107690209
chr19 13162232 13165980 ZNF274 GTRD no Bone Marrow (K562) 108388211
chr19 13162233 13165919 ZNF274 GTRD no Liver (HepG2) 21850470
chr19 13162233 13165919 ZNF274 GTRD no Liver (HepG2) 107690210
chr19 13162233 13165919 ZNF274 GTRD no Liver (HepG2) 108388212
chr19 13162241 13165852 ZBTB33 GTRD no Lung (A549) 107690212
chr19 13162241 13165852 ZBTB33 GTRD no Lung (A549) 108388214
chr19 13162262 13165776 ZNF143 GTRD no Epithelial (MCF-7) 107690214
chr19 13162262 13165776 ZNF143 GTRD no Epithelial (MCF-7) 108388216
chr19 13162272 13165617 ZNF274 GTRD no Liver (HepG2) 21850473
chr19 13162272 13165617 ZNF274 GTRD no Liver (HepG2) 107690217
chr19 13162272 13165617 ZNF274 GTRD no Liver (HepG2) 108388219
chr19 13162293 13165898 ZNF274 GTRD no Cervix (HeLa-S3) 107690220
chr19 13162293 13165898 ZNF274 GTRD no Cervix (HeLa-S3) 108388222
chr19 13162298 13165942 ZNF274 GTRD no Cervix (HeLa-S3) 107690221
chr19 13162298 13165942 ZNF274 GTRD no Cervix (HeLa-S3) 108388223
chr19 13162309 13165783 ZBTB33 GTRD no Lung (A549) 107690222
chr19 13162309 13165783 ZBTB33 GTRD no Lung (A549) 108388224
chr19 13162332 13165776 ZBTB33 GTRD no Lung (A549) 107690224
chr19 13162332 13165776 ZBTB33 GTRD no Lung (A549) 108388226
chr19 13162348 13165790 ZNF143 GTRD no Epithelial (MCF-7) 107690227
chr19 13162348 13165790 ZNF143 GTRD no Epithelial (MCF-7) 108388229
chr19 13162385 13165832 ZBTB33 GTRD no Lung (A549) 107690232
chr19 13162385 13165832 ZBTB33 GTRD no Lung (A549) 108388234
chr19 13162534 13165742 ZNF143 GTRD no Epithelial (MCF-7) 107690266
chr19 13162534 13165742 ZNF143 GTRD no Epithelial (MCF-7) 108388268
chr19 13163959 13165952 ZNF274 GTRD no Bone Marrow (K562) 107690323
chr19 13163959 13165952 ZNF274 GTRD no Bone Marrow (K562) 108388325
chr19 13164059 13165832 STAT3 GTRD no Blood (OCI-LY7) 107690327
chr19 13164059 13165832 STAT3 GTRD no Blood (OCI-LY7) 108388329
chr19 13164281 13165597 ZNF274 GTRD no Liver (HepG2) 21850529
chr19 13164281 13165597 ZNF274 GTRD no Liver (HepG2) 107690353
chr19 13164281 13165597 ZNF274 GTRD no Liver (HepG2) 108388355
chr19 13164365 13165631 ZNF274 GTRD no Liver (HepG2) 21850535
chr19 13164365 13165631 ZNF274 GTRD no Liver (HepG2) 107690373
chr19 13164365 13165631 ZNF274 GTRD no Liver (HepG2) 108388375
chr19 13164425 13165630 ZNF274 GTRD no Liver (HepG2) 21850541
chr19 13164425 13165630 ZNF274 GTRD no Liver (HepG2) 107690385
chr19 13164425 13165630 ZNF274 GTRD no Liver (HepG2) 108388387
chr19 13164462 13165577 ZNF274 GTRD no Cervix (HeLa-S3) 107690392
chr19 13164462 13165577 ZNF274 GTRD no Cervix (HeLa-S3) 108388394
chr19 13165562 13165577 MEF2C JASPAR yes 108572066
chr19 13165562 13165577 MEF2C JASPAR yes 112505607
chr19 13165564 13165576 MEF2D JASPAR yes 108572067
chr19 13165564 13165576 MEF2D JASPAR yes 112505608
Genes associated with rs28412508[chr19:13165569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More