EnhancerDB
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  3. rs28416570[chr17:7958290]
Enhancers that have rs28416570[chr17:7958290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 7955689 7975155 enh16963
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Stomach Placenta Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs28416570[chr17:7958290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 7957254 7958488 ZNF143 GTRD no Epithelial (MCF-7) 21741584
chr17 7957259 7958762 AR GTRD no Prostate (PC-3) 21741585
chr17 7957367 7958326 ZNF143 GTRD no Epithelial (MCF-7) 21741587
chr17 7957583 7958371 ZNF143 GTRD no Epithelial (MCF-7) 21741595
chr17 7957594 7958439 ZNF143 GTRD no Epithelial (MCF-7) 21741597
chr17 7957595 7958321 ZNF143 GTRD no Epithelial (MCF-7) 21741598
chr17 7957610 7958310 ZNF143 GTRD no Epithelial (MCF-7) 21741601
chr17 7957624 7958327 ZNF143 GTRD no Epithelial (MCF-7) 21741603
chr17 7957664 7958502 ZNF143 GTRD no Epithelial (MCF-7) 21741608
chr17 7957763 7958468 ZNF143 GTRD no Epithelial (MCF-7) 21741616
chr17 7958284 7958297 SCRT2 JASPAR yes 52964070
Genes associated with rs28416570[chr17:7958290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More