EnhancerDB
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  3. rs28418398[chr14:100009960]
Enhancers that have rs28418398[chr14:100009960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 99982692 100045122 enh3448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28418398[chr14:100009960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 100009301 100013559 ZNF143 GTRD no Epithelial (MCF-7) 21637931
chr14 100009301 100013559 ZNF143 GTRD no Epithelial (MCF-7) 108122272
chr14 100009622 100013846 ZNF143 GTRD no Epithelial (MCF-7) 21637932
chr14 100009622 100013846 ZNF143 GTRD no Epithelial (MCF-7) 108122273
chr14 100009811 100013746 ZNF143 GTRD no Epithelial (MCF-7) 21637933
chr14 100009811 100013746 ZNF143 GTRD no Epithelial (MCF-7) 108122274
chr14 100009954 100009972 IRF2 JASPAR yes 117716459
Genes associated with rs28418398[chr14:100009960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr14 99977603 100070363 - CCDC85C ENSG00000205476.4 100070363 0 Pancreas 0.0476384 13631