EnhancerDB
  1. Home
  2. SNP
  3. rs2842196[chr1:43927411]
Enhancers that have rs2842196[chr1:43927411]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs2842196[chr1:43927411]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43927400 43927415 SCRT1 JASPAR yes 28496218
Genes associated with rs2842196[chr1:43927411], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More