EnhancerDB
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  3. rs28431074[chr18:57617190]
Enhancers that have rs28431074[chr18:57617190]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs28431074[chr18:57617190]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57617169 57617190 IRF1 JASPAR yes 111067160
chr18 57617170 57617191 IRF1 JASPAR yes 111067162
chr18 57617171 57617192 IRF1 JASPAR yes 111067164
chr18 57617172 57617193 IRF1 JASPAR yes 111067166
chr18 57617173 57617194 IRF1 JASPAR yes 111067168
chr18 57617174 57617195 IRF1 JASPAR yes 111067170
chr18 57617175 57617190 FOXP1 JASPAR yes 111067171
chr18 57617177 57617192 FOXP1 JASPAR yes 111067172
chr18 57617178 57617199 IRF1 JASPAR yes 111067173
chr18 57617179 57617194 FOXP1 JASPAR yes 111067174
chr18 57617179 57617200 IRF1 JASPAR yes 111067175
chr18 57617180 57617201 IRF1 JASPAR yes 111067176
chr18 57617183 57617204 IRF1 JASPAR yes 111067177
chr18 57617184 57617199 FOXP1 JASPAR yes 111067178
chr18 57617187 57617208 IRF1 JASPAR yes 111067179
chr18 57617188 57617203 FOXP1 JASPAR yes 111067180
chr18 57617189 57617210 IRF1 JASPAR yes 111067181
Genes associated with rs28431074[chr18:57617190], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More