EnhancerDB
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  3. rs28452048[chr16:85166019]
Enhancers that have rs28452048[chr16:85166019]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28452048[chr16:85166019]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85165833 85168881 ZNF274 GTRD no Liver (HepG2) 21720048
chr16 85165839 85166409 ZNF274 GTRD no Liver (HepG2) 21720049
chr16 85165842 85166391 ZNF274 GTRD no Liver (HepG2) 21720050
chr16 85165857 85166363 ZNF274 GTRD no Liver (HepG2) 21720051
chr16 85166000 85168296 ZNF274 GTRD no Liver (HepG2) 21720052
chr16 85166002 85166019 ESR1 JASPAR yes 12022886
chr16 85166002 85166020 ESR2 JASPAR yes 12022887
chr16 85166006 85166020 TLX1 JASPAR yes 12022888
Genes associated with rs28452048[chr16:85166019], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More