EnhancerDB
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  3. rs28460503[chr6:17719770]
Enhancers that have rs28460503[chr6:17719770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs28460503[chr6:17719770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17719755 17719770 FOXP1 JASPAR yes 100396794
chr6 17719755 17719770 HNF1A JASPAR yes 100396795
chr6 17719756 17719770 FOXF2 JASPAR yes 100396797
chr6 17719756 17719770 ONECUT3 JASPAR yes 100396798
chr6 17719756 17719770 POU4F1 JASPAR yes 100396799
chr6 17719757 17719773 POU4F2 JASPAR yes 100396803
chr6 17719757 17719773 POU4F3 JASPAR yes 100396804
chr6 17719758 17719773 MEF2A JASPAR yes 100396806
chr6 17719759 17719771 FOXI1 JASPAR yes 100396807
chr6 17719759 17719773 POU4F1 JASPAR yes 100396808
chr6 17719759 17719774 MEF2C JASPAR yes 100396809
chr6 17719760 17719772 FOXC2 JASPAR yes 100396810
chr6 17719761 17719772 FOXC1 JASPAR yes 100396811
chr6 17719766 17719774 FOXL1 JASPAR yes 100396813
chr6 17719766 17719781 FOXA1 JASPAR yes 100396814
chr6 17719767 17719779 FOXI1 JASPAR yes 100396815
chr6 17719767 17719782 FOXP1 JASPAR yes 100396816
chr6 17719768 17719780 FOXC2 JASPAR yes 100396817
chr6 17719768 17719782 ONECUT3 JASPAR yes 100396818
chr6 17719769 17719780 FOXB1 JASPAR yes 100396819
chr6 17719769 17719780 FOXC1 JASPAR yes 100396820
chr6 17719770 17719774 YY1 TRANSFAC yes 100396821
Genes associated with rs28460503[chr6:17719770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More