EnhancerDB
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  3. rs28461384[chr1:154798550]
Enhancers that have rs28461384[chr1:154798550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs28461384[chr1:154798550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154798533 154798554 IRF1 JASPAR yes 32315138
chr1 154798534 154798555 IRF1 JASPAR yes 32315139
chr1 154798535 154798555 RREB1 JASPAR yes 32315140
chr1 154798536 154798550 IRF7 JASPAR yes 32315141
chr1 154798538 154798550 IRF1 JASPAR yes 32315142
chr1 154798538 154798553 STAT2 JASPAR yes 32315143
chr1 154798539 154798554 FOXP1 JASPAR yes 32315144
chr1 154798539 154798560 IRF1 JASPAR yes 32315145
chr1 154798540 154798561 IRF1 JASPAR yes 32315146
chr1 154798541 154798561 RREB1 JASPAR yes 32315147
chr1 154798542 154798556 IRF7 JASPAR yes 32315148
chr1 154798544 154798556 IRF1 JASPAR yes 32315149
chr1 154798544 154798559 STAT2 JASPAR yes 32315150
chr1 154798545 154798560 FOXP1 JASPAR yes 32315151
chr1 154798545 154798566 IRF1 JASPAR yes 32315152
chr1 154798546 154798567 IRF1 JASPAR yes 32315153
chr1 154798547 154798567 RREB1 JASPAR yes 32315154
chr1 154798548 154798562 IRF7 JASPAR yes 32315155
chr1 154798550 154798562 IRF1 JASPAR yes 32315156
chr1 154798550 154798565 STAT2 JASPAR yes 32315157
Genes associated with rs28461384[chr1:154798550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More