EnhancerDB
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  3. rs28461709[chr17:57503247]
Enhancers that have rs28461709[chr17:57503247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
chr17 57502934 57503327 vista25327
VISTA
Transcript factors that have rs28461709[chr17:57503247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57503245 57503254 THAP1 JASPAR yes 21264246
chr17 57503245 57503254 THAP1 JASPAR yes 55058718
Genes associated with rs28461709[chr17:57503247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More