EnhancerDB
  1. Home
  2. SNP
  3. rs28476594[chr2:28583112]
Enhancers that have rs28476594[chr2:28583112]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28476594[chr2:28583112]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28583100 28583113 SMAD2 JASPAR yes 72641771
chr2 28583108 28583117 SNAI2 JASPAR yes 72641772
chr2 28583108 28583118 TCF4 JASPAR yes 72641773
chr2 28583110 28583119 ZEB1 JASPAR yes 72641774
chr2 28583112 28583117 SP1 TRANSFAC yes 72641775
Genes associated with rs28476594[chr2:28583112], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More