EnhancerDB
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  3. rs28495311[chr16:88301363]
Enhancers that have rs28495311[chr16:88301363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs28495311[chr16:88301363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88301047 88302401 TCF7L2 GTRD no Colon (HCT116) 21735719
chr16 88301305 88302305 TCF7L2 GTRD no Colon (HCT116) 21735720
chr16 88301340 88302289 TCF7L2 GTRD no Colon (HCT116) 21735721
chr16 88301355 88301365 SP1 JASPAR yes 12272225
chr16 88301356 88301366 SP1 JASPAR yes 12272226
Genes associated with rs28495311[chr16:88301363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More