EnhancerDB
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  3. rs28524522[chr17:70378201]
Enhancers that have rs28524522[chr17:70378201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28524522[chr17:70378201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70377636 70378637 ZBTB33 GTRD no Brain (SK-N-SH) 21784391
chr17 70377809 70378498 ZBTB33 GTRD no Brain (SK-N-SH) 21784392
chr17 70377836 70378566 ZBTB33 GTRD no Brain (SK-N-SH) 21784393
chr17 70377902 70378601 ZBTB33 GTRD no Brain (SK-N-SH) 21784394
chr17 70377940 70378364 ZBTB33 GTRD no Brain (SK-N-SH) 21784395
chr17 70377945 70378480 ZNF143 GTRD no Epithelial (MCF-7) 21784396
chr17 70378017 70378472 ZNF143 GTRD no Epithelial (MCF-7) 21784397
chr17 70378024 70378418 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21784398
chr17 70378073 70378518 ZNF143 GTRD no Epithelial (MCF-7) 21784399
chr17 70378102 70378462 ZNF143 GTRD no Epithelial (MCF-7) 21784400
chr17 70378103 70378547 ZNF143 GTRD no Epithelial (MCF-7) 21784401
chr17 70378147 70378611 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21784402
chr17 70378195 70378202 SP1 TRANSFAC yes 55780686
chr17 70378195 70378204 SP1 TRANSFAC yes 55780687
chr17 70378201 70378205 LFA1 TRANSFAC yes 55780688
Genes associated with rs28524522[chr17:70378201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More