EnhancerDB
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Enhancers that have rs28525499[chr16:378118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs28525499[chr16:378118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 377933 380354 ZNF143 GTRD no Epithelial (MCF-7) 21683885
chr16 377933 380354 ZNF143 GTRD no Epithelial (MCF-7) 108170281
chr16 377935 378510 ZNF143 GTRD no Epithelial (MCF-7) 21683886
chr16 377935 378510 ZNF143 GTRD no Epithelial (MCF-7) 108170282
chr16 378111 378121 SP1 JASPAR yes 9105153
chr16 378112 378122 SP1 JASPAR yes 9105154
chr16 378113 378118 SP1 TRANSFAC yes 9105155
chr16 378114 378119 SP1 TRANSFAC yes 9105156
chr16 378114 378120 SP1 TRANSFAC yes 9105157
Genes associated with rs28525499[chr16:378118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More