EnhancerDB
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  3. rs28534706[chr14:56053996]
Enhancers that have rs28534706[chr14:56053996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 56037325 56062723 enh3218
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Liver Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs28534706[chr14:56053996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 56053978 56053996 SRF JASPAR yes 115561604
chr14 56053981 56054002 IRF1 JASPAR yes 115561606
chr14 56053983 56053998 IRF9 JASPAR yes 115561607
chr14 56053984 56053998 IRF7 JASPAR yes 115561610
chr14 56053984 56053998 IRF8 JASPAR yes 115561611
chr14 56053985 56053999 STAT1 JASPAR yes 115561612
chr14 56053985 56054000 PRDM1 JASPAR yes 115561613
chr14 56053985 56054000 STAT2 JASPAR yes 115561614
Genes associated with rs28534706[chr14:56053996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More