EnhancerDB
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  3. rs2853618[chr1:236699033]
Enhancers that have rs2853618[chr1:236699033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236692957 236700017 enh27642
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Blood (T-cell) Heart
chr1 236698906 236699167 vista5759
VISTA
Transcript factors that have rs2853618[chr1:236699033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236698901 236699197 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21404518
chr1 236698901 236699197 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107886967
chr1 236699027 236699038 USF1 JASPAR yes 36423253
chr1 236699027 236699038 USF1 JASPAR yes 118491263
chr1 236699028 236699038 TFEB JASPAR yes 36423254
chr1 236699028 236699038 TFEC JASPAR yes 36423255
chr1 236699028 236699038 TFEB JASPAR yes 118491264
chr1 236699028 236699038 TFEC JASPAR yes 118491265
chr1 236699028 236699039 USF2 JASPAR yes 36423256
chr1 236699028 236699039 USF2 JASPAR yes 118491266
chr1 236699033 236699046 SMAD2 JASPAR yes 36423257
chr1 236699033 236699046 SMAD2 JASPAR yes 118491267
Genes associated with rs2853618[chr1:236699033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More