EnhancerDB
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  3. rs28538852[chr16:11194973]
Enhancers that have rs28538852[chr16:11194973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28538852[chr16:11194973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11194456 11195068 ZNF274 GTRD no Bone Marrow (K562) 21689562
chr16 11194456 11195068 ZNF274 GTRD no Bone Marrow (K562) 108180193
chr16 11194952 11194973 MAFG JASPAR yes 9486926
chr16 11194969 11194975 LEF1 TRANSFAC yes 9486928
chr16 11194969 11194975 SOX10 JASPAR yes 9486929
Genes associated with rs28538852[chr16:11194973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More