EnhancerDB
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  3. rs28540598[chr15:60866368]
Enhancers that have rs28540598[chr15:60866368]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 60858504 60880255 enh47870
Liver (HepG2) Brain (SK-N-MC) Blood (T-cell) Esophagus Liver Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
chr15 60865969 60866384 vista20190
VISTA
Transcript factors that have rs28540598[chr15:60866368]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 60865922 60866580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21656543
chr15 60865922 60866580 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108142594
chr15 60865958 60866554 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21656545
chr15 60865958 60866554 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108142596
chr15 60866027 60866443 RELA UCSC Txn Factor no Conserved 108142597
chr15 60866109 60866419 POU2F2 UCSC Txn Factor no Conserved 108142598
chr15 60866122 60866402 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21656547
chr15 60866122 60866402 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108142601
chr15 60866134 60866370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21656548
chr15 60866134 60866370 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108142602
chr15 60866137 60866373 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21656549
chr15 60866137 60866373 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108142603
chr15 60866364 60866368 H1TF2 TRANSFAC yes 23800602
chr15 60866364 60866368 NFE TRANSFAC yes 23800603
chr15 60866364 60866368 SRF TRANSFAC yes 23800604
chr15 60866364 60866368 H1TF2 TRANSFAC yes 70534351
chr15 60866364 60866368 NFE TRANSFAC yes 70534352
chr15 60866364 60866368 SRF TRANSFAC yes 70534353
Genes associated with rs28540598[chr15:60866368], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More